Expression Array Data

 

3' Expression Arrays


Data from 337 hybridizations were obtained using bone marrow-derived macrophage (BMDM) samples from various mouse strains, stimulated with various agonists, for stimulus durations ranging from 20 min to 48 hrs.

Hybridization intensities from Affymetrix Mouse GeneChip 430 2.0 3' expression microarrays were processed and combined through a modular software pipeline to produce gene level-summarized, replicate-combined, annotated expression intensities. For more details, please refer to the Protocols section under the Genomics tab.

The log2 intensities for representative probesets for all 21,509 genes across all 171 conditions, with additional annotation information about each gene, are available for download as a Zip-compressed Microsoft Excel spreadsheet.

 loading arrays ...


 

Exon Arrays


Data from 53 expression arrays were obtained using bone marrow-derived macrophage (BMDM) samples from various mouse strains, stimulated with various agonists, with stimulus durations ranging from 60 to 720 minutes.

Hybridization intensities from Affymetrix GeneChip Mouse Exon 1.0 ST Arrays were processed through a modular software pipeline to produce gene-level annotated expression intensities. For experimental details please refer to the protocols section under the Genomics tab.

The log2 intensities for all 24,124 genes across 27 conditions with additional annotation information about each gene are available for download as a Microsoft Excel spreadsheet and a Tab delimited text file.

Replicate combined expression values were also calculated for each condition. They are available for download as a Microsoft Excel spreadsheet and a Tab delimited text file.

 loading arrays ...